Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943821.1_cds_XP_016486801.1_77603
CDS Infomation

[gene=LOC107807036] [db_xref=GeneID:107807036] [protein=subtilisin-like protease SBT2.5] [protein_id=XP_016486801.1] [location=join(38447..38622,40244..40388,40485..40879,42316..42411,42513..42585,42924..43209,43994..44319,45157..45424,45876..46157,47619..48025)] [gbkey=CDS]
Sequence

ATGAGAGGGATGTGTTTTGGCCTTGCTATTGTATTGTTATTGGGAATCTTGAATGTTGGG
AAGGCTGAAATCTACATAGTAACAGTTGAAGGAGAGCCTGTTATAAGTTATAAAGGCGAC
ATTGATGGTTTTGAAGCCACTGCTTCAGAGTCTGATGAGAAAATTGATACCACTAGTGAA
TTGGTTACATCCTATGCCCAACATCTGGAAAAGAAGCATGATATGCTTCTAGCTTTGCTA
TTTGACCGTGGGACCTACAAGAAAATCTACAGTTACCATCATCTAATTAATGGCTTTGCA
GCTCACATTTCACATGAGCAGGCAGAAATCCTCAGACGAGCTCCTGGTGTGAAGTCTGTG
GAGAGAGATTGGAAGGTCAGGAGGCTTACAACTCACACGCCACAGTTTTTGGGGCTTCCT
ACAGGAGTATGGCCGACTGGTGGTGGGTTTGACCGGGCAGGCGAGGATATTGTAATTGGC
TTTGTGGACTCTGGCATCTATCCGCACCATCCAAGTTTTTCAAGCCACAATGCTGAACCT
TATGGACCTCTTCCAAAATATAGAGGAAAATGTGAAGTTGATCCAAACACCAAGAAAGAC
TATTGTAATGGAAAGATTATTGGTGCTCAACATTTTGCAGAAGCTGCCAAAGCAGCTGGC
GCATTTAATCCTACAATGGATTATGATTCTCCTCTTGACGGTGATGGACACGGAAGCCAT
ACGGCAGCTATCGCTGCTGGAAACAATGGGATTCCTGTTAGGATGCACGGATTTGAATTC
GGAAGAGCAAGTGGTATGGCACCTCGTGCAAGAATTGCCGTATACAAGGCACTGTACAGG
CTATTTGGAGGGTTTGTTGCTGATGTGGTTGCTGCTATTGAACAGGCTGTTCGTGATGGT
GTGGACATACTTAATCTTTCTGTGGGGCCAAACAGTCCACCAGCAACTACAAAGACAACA
TTTTTGAACCCTTTTGATGCTACACTTCTTTCAGCTGTGAAAGCCGGTGTATTTGTTGCA
CAGGCTGCTGGAAATGGAGGTCCTTTCCCTAAAACTTTGTTGTCTTATAGTCCATGGATA
GTATCAGTGGCTGCTGCAGTTGATGATCGTAGATACAAGAATTATTTGACCTTGGGAAAT
GGGAAAATCCTACCTGGAATTGGGTTATCACCTTCTACACATCCAAACCGGACATTCACC
ATGGTAGCAGCTAATGATGTTCTTTTGGATTCTTCGGTTACGAAGTACAGTCCTGCCGAC
TGTCAAAGGCCAGAAGTTTTAAACAAGAATTTGGTGGAGGGAAACATCCTTCTTTGTGGC
TATTCTTTCAATTTCGTAGTTGGCACGGCCTCGATTAAAAAAGTCGCTGAAACAGCAAAG
GCTCTTGGTGCAGCTGGCTTTGTTCTTGCTGTAGAAAATGCTTCACCAGGAACAAAGTTT
GACCCTGTTCCTGTTAGTATTCCTGGAATTCTCATAACAGATGCTTCCAAGTCAATGGAG
CTTGTAGATTATTACAATATCACCACTTCAAGAGATTGGACTGGACGAGTTAAGAGCTTT
AAGTCAACAGGTAGCATTGGAAATGGGTTGCGGCCAATACTCCACAAGTCTGCACCTCAA
GTAGCTATCTTCTCTGCTAGAGGACCTAATATCAAAGATTACAGCTTTCAAGATGCCGAT
CTCCTGAAACCAGATATACTTGCTCCCGGTTCTCTTATTTGGGCTGCCTGGGCTCCGAAC
GGGACAGATGAAGCCAACTTTTGTGGTGAAGGATTTGCATTGATCTCTGGAACTAGCATG
GCAGCACCCCATATAGCAGGAATAGCTGCGCTCATCAAGCAGCACCACCCTCATTGGAAC
CCTGCTGCTATTAAATCTGCGTTAATGACAACTTCATCGACTATTGATAGAGCAGAGAGA
CCACTTCAAGCGCAACAGTATTCTGGATCTGAGTCCTTGACACTCGTTCCAGCTACTCCG
TTTGACTATGGAAGTGGACATGTTAATCCTAGAGCAGCTCTGGATCCTGGACTCATTTTT
AATGCAGGTTACCAAGATTATTTGGGGTTCTTGTGCACTGTGCCTGGAATTGATCCTCAC
GAGATAAAGAACTTCACGCATTCCCCATGCAACTACACCCTTGGTCACCCATCAAATTTC
AACTCACCCTCAATTGCAGTTTCACATCTTGTGGGAACTCGAACTGTCACACGCACAGTA
ATAAATGTTGCCGAGGAAGAAACTTATGTTATAACAGCAAGAATGGCTCCAGAAATTGCT
ATTGAAACTAATCCTCCTGCAATGACTTTAAGGCATGGCGCGTCGAGGAAATTCACAGTA
ACACTCACTGTCCGATCAGTAACAGGAGCGTACAGTTTCGGAGAGGTTTTACTGAAAGGT
AGCAGAGGGCACAAAGTCAGGATCCCTGTTGTAGCTGCAGGTTATGATCGATAG

Peptide Sequence

PEP ID

XP_016486801.1
PEP Infomation

PREDICTED: subtilisin-like protease SBT2.5 [Nicotiana tabacum]
Sequence

MRGMCFGLAIVLLLGILNVGKAEIYIVTVEGEPVISYKGDIDGFEATASESDEKIDTTSE
LVTSYAQHLEKKHDMLLALLFDRGTYKKIYSYHHLINGFAAHISHEQAEILRRAPGVKSV
ERDWKVRRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFSSHNAEP
YGPLPKYRGKCEVDPNTKKDYCNGKIIGAQHFAEAAKAAGAFNPTMDYDSPLDGDGHGSH
TAAIAAGNNGIPVRMHGFEFGRASGMAPRARIAVYKALYRLFGGFVADVVAAIEQAVRDG
VDILNLSVGPNSPPATTKTTFLNPFDATLLSAVKAGVFVAQAAGNGGPFPKTLLSYSPWI
VSVAAAVDDRRYKNYLTLGNGKILPGIGLSPSTHPNRTFTMVAANDVLLDSSVTKYSPAD
CQRPEVLNKNLVEGNILLCGYSFNFVVGTASIKKVAETAKALGAAGFVLAVENASPGTKF
DPVPVSIPGILITDASKSMELVDYYNITTSRDWTGRVKSFKSTGSIGNGLRPILHKSAPQ
VAIFSARGPNIKDYSFQDADLLKPDILAPGSLIWAAWAPNGTDEANFCGEGFALISGTSM
AAPHIAGIAALIKQHHPHWNPAAIKSALMTTSSTIDRAERPLQAQQYSGSESLTLVPATP
FDYGSGHVNPRAALDPGLIFNAGYQDYLGFLCTVPGIDPHEIKNFTHSPCNYTLGHPSNF
NSPSIAVSHLVGTRTVTRTVINVAEEETYVITARMAPEIAIETNPPAMTLRHGASRKFTV
TLTVRSVTGAYSFGEVLLKGSRGHKVRIPVVAAGYDR

Transcript Sequence

Gene sequence data has not been registered.